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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|126638393, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFTKASALAL AIGGVSTFAQ AADDLIISEY VEGSSNNKAV EFYNPTGAAI DLSQYQLEFY  60
   61 FNGSTSAGST IALTGSLAAG KTYVLADNDA AAEILAVADQ LSTASFFNGD DTLVLRKQGQ 120
  121 VIDSLGQLGT DPGSEWGSGD LSTQNNTLRR DPNQLIADTQ LDDAVTLATW TGHAQDDFSD 180
  181 LGQFAGQGPT DPTDPTDPTE PPVGLVCHDP ATKISELQGS GDISPLNGQS VMVEAIVTSN 240
  241 QEAGLKGLFL QMADAEADAD INTSEGVFVY TGGSLGYQAG DRVRLTAMVK EYNGLTELTN 300
  301 VSEHALCDSA QALPSAAEVS LPLAQSSDLE AVEGMRVHFT QNLVVNEVYN LGRYGEILLG 360
  361 SKRHFIGTQV AEPGSEALAV SQANALDSVL LDDGLTSQNP DPVRYPAPGL SADNTVRVGD 420
  421 SITELHAVMH YGFGKYRLMP IDTVNFVATN PRSSEPALAA GGNLKVASFN VLNYFNGDGL 480
  481 GGGFPTDRGA DTPSEFARQR AKIISAMVSI DADIFGLMEI ENDGFGTESA INDLVSGLNQ 540
  541 AVGEARYQFI SAPTPTIGTD AITVGMLYRS DRVRPVGAAK VLSSANSPLD EQGEVLFNDG 600
  601 KNRPSLTQAF EVLVEDQQLV VAVNHLKSKG SDCVSLGDPD LNDGQGNCNL TRTRAATALG 660
  661 AWLASEYGEL PTLVIGDMNA YAKEDPIDAL RGAGYLELFD HLGKSGAYSY VFSGETGQLD 720
  721 HALANTQLAD RVVDVTEWHI NTDEPRLLDY NEEFKSAGQI ESLYSSDAYR SSDHDPVVIS 780
  781 LLLERETIAP VASFSYELQG RTLSLVSSAT DEDGEIVDYQ WDLGNGETAS GEQLSYRYAK 840
  841 AGEYPVTLTV TDNDGLSHSV TQVVKVQVKQ QKPVAVIEHL DLWFMHLFVS LSYDTDGEIV 900
  901 SQSWKFNNGS KQTGPVAISF GHRASKVKLT VEDNDGLKGK AKLNF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle