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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|126639682, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.57
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSKQAKRKQK PQLIHWRLYV VVGFVCLLFT SLVGRAAYIQ IIEPEKLRHE SDMRTLRTTS  60
   61 NEVHRGMITD RNGEMLAVSV PVKAVYADPK VVHDRNGFAD MRRWQALADV LHEPKEEILA 120
  121 RVQTNPKKRF TYLKRQVTPA VAEYIKQLKL PGVYLKAESR RYYPTSEISA QLVGLTNIDD 180
  181 KGIEGIESTY NDWLTGTPTK HKVRKSRDGH VVERLDTVQT GESSNDLVLS IDQRIQQLAY 240
  241 REIKRATEIN QATSASIVVL DVHTGEVLAM ANTPSYNPNS RDNLQSYRMR NRALTDAYEP 300
  301 GSTIKPFVVA AALEAGTIKE DQIFKTHPGR VRIGGKIVRD GRNYGDMSLG DVLVHSSNVG 360
  361 MTQIALSMPV QELLGYYQAM GLGNYSGINL PGESAGLIHD RRRWSDFERA TLSFGYALTV 420
  421 TPLQIARMYA MLGSGGVLYP SSILKLKKEP EGEQVISPEV ARSVMQMLIG VTEPGGTAKK 480
  481 AHIDGYPVAG KTGTARKAVA GGYGEDYVAL FAGVAPVHNP RLAMVVVVNE PKGDRYYGGD 540
  541 VAAPVFAKVM SGALQMLNVE PISAREKVQL AGNVRRGE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle