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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|78368096, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.92
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNRRDFLKGL AASSYVTLSG SSLLAPLNAL ASTGTDEVWK TTGSHFGAFK MTRKNGVIDK  60
   61 VISFDLDKYP TDMINGVKGL VYNPSRVRYP MVRLDFLLKG HKSNTLERGD YRFVRVTWDR 120
  121 ALSLFKDSLD EIQTKYGPSG LHAGQTGWRA TGQLHSSTSH MQRAVGMHGN FVKKVGDYST 180
  181 GAGQTILPYV LGSTEVYAQG TSWPLILEHS DTIVLWSNDP YKNLQVGWNA ETHESYAYLA 240
  241 QLKEKVAQGK IRVISIDPVV TKTQKYLGCE QLYINPQTDV ALMLGIAHEM VSQNLHDKAF 300
  301 IEGYSLGFDE FLPYLLGEKD GVAKTPEWAS QITGVSVEII KDLAKVMTKG RTQIMMGWCI 360
  361 QRQQHGEQPY WMAAVLATMI GQIGLPGGGI SYGHHYSSIG VPSSGAAAPG AFPRNLDEGQ 420
  421 KPLFDSSDFK GASSTIPVAR WIDAILEPGK TIDANGSKVT YPDIKMMVFS GNNPWNHHQD 480
  481 RNKMKRAFHK LECVVTIDVN WTATCRFSDI VLPACTTFER NDIDVYGSYA NRGVLAMQKM 540
  541 VEPLYESLSD FEIFTRFAAL MGKEKQYTRG LTEMDWLRKL YDECKAANAG KFEMPDFNTF 600
  601 WQQGYVHFGE GENWTRHSDF RDDPEINPLG TPSGLIEIFS RKIAQFNYDD CPGHPSWMEK 660
  661 SERSHGGPGS DKYPIWMQSC HPDQRLHSQM CESQEYRETY TVQGREPVYL NPLDAKARGI 720
  721 KDGDLVRVFN DRGQLLAGAR VSNRFPQGVI RIHEGAWYGP VGKDGSKQGG NEIGALCSYG 780
  781 DPNTLTQDIG SSKLAQACAA YTCLVEFEKF SGKVPEVSAF SGPIEISR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle