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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|78368063, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.43
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNQDTLFSLS QNAALLLIMV FIYDAVPRHH RSEYFLLWRL IMGAVIGGVT VLTMMTSWEY  60
   61 QPGVFIDTRS VVLAISGLFF GGLPTFVAAS VACAYRLFQG GDGMLVGVTV ILVSALFGSL 120
  121 WRYYRKTTIA DLSFIELYLF GFLLHFSTLS LLFILPFSMF VDLLVQIALP VMLIFPIVTA 180
  181 LLGMMLARRL EVERDAKIQL QDDFIFRSQF NVGNMGIAIT SVDQHWIKVN PRLCKMLKYS 240
  241 ETELLNRTWT ELTYFEDLKA DMTQFQRMLK GEIDAYEMDK RFVAKDGEIV YTHLTVACRR 300
  301 NHNMVDMVIA GLIDITEHKR ADMAMRTSQE RLALVLESSD LGMWDWDIKS NETKRNPWCA 360
  361 KVLGCDLERL NRDSRIWIDA IHPQDRMAVL NSIDRHLKGE TQKHYIEYRL ISLSGEEHWI 420
  421 LDTGKVVSRD RNGLPTRMCG VHSDITEQKK VQESLELAAS VYNNSSEAMS VQDHKGHIIT 480
  481 INAAFTAITG YSQEEALTQN IRILQSSRTP RSQYDEMNSA IRDTGYWQGE LWIKNKSGEE 540
  541 YMVWLTINTI FDQHGQVYRR VALFSDITEK KEAEHIIWKQ ANYDPLTGLP NRRMLLEYLN 600
  601 TEILRIDRNH SHFALMFLDL DFFKEVNDTL GHDMGDLLLQ ETAKRLKGCI RESDVVARLG 660
  661 GDEFTVVLSG IDSPSGVERV AQSILERIAE PYSLGDETAY ISASIGITIY PDDATSIEGL 720
  721 LKHADQAMYA AKEQGRNRFH YFTPSMQEYA RYRMALIKDL RNAINRKEFE LFYQPIVDMN 780
  781 KLGVYKAEAL IRWVHPQRGL VSPGEFIPVA EETGLINEIG NWVFEKAAQQ SARWRTQHGV 840
  841 EIQISINKSP IQFRDEGDTF SDWLALLRHL ELSSNAICVE ITEGLLLDAS MGVTDKLLAY 900
  901 RDAGIQVSLD DFGTGYSSLA YLKKFDIDYL KIDQSFTRNL ESDSDGVALC EAIIVMAHKL 960
  961 GIKVIAEGVE TQFQHDILAS AGCDFAQGYL YSKPVSLPEF ERLYVNPEAR 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle