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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|78360494, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.50
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKTNYSRRDF LAMSAKGVGA AVVSYGLMGC SSSDDDKQET APKVQFLHGI ASGDPTPSAV  60
   61 ILWTRVTPDT DGDVKVGWEI ASDANFTQMI SNGETTTNAD RDYTVKVDAI GLDSGTAYYY 120
  121 RFMSGEQVSS VGMTKTLPEG AVEQVKLAVM SCANFPAGYF NVYELAGQQE GLDAVVHLGD 180
  181 YIYEYGRGGY ASEHAAELGR EVLPAGELFT LSDYRTRYGQ YRSDESLQTL HAKVPFITVW 240
  241 DDHEVANDTW SGGAENHNEG EGDFEARKMG ALQAYFEWLP IRPWREGNHE EIYRSFSFGD 300
  301 LVDLHMLDTR VLARDKQLDY ADYVDATTGA MDSARFMADV TSTERTLLGA EQLQWLQASL 360
  361 LGATGKWQVL GQQILMGTMM LPAAIAMQKL SVYEYAELGA LAQLAARAAA NDPTLTPQEY 420
  421 SFLIGNQYKL TPEVMALLQL PSIPYNLDAW DGYAYEREVI LATAKQKGAN LVVIAGDTHN 480
  481 AWANELKDSH GDLVGVEYAT SSVSSPGLEY YLGIPADQQS VTEAGVVDLV DGLKYTNLRD 540
  541 RGFMVLTFTS EAVRSDWHFV DTILDSEFSE ATEKHYAAMT MAGEPKITAA 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle