YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|78360571, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.90
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLDKLKKIWQ VLRKPSVHFS LGFLTLGGFV AGVIFWGGFN TALEATNQEA FCIGCHEMEN  60
   61 NVYQELKSTI HFTNRSGVRA TCPDCHVPHN WTDKIARKMQ ASKEVWGKVF GTINTRDKFE 120
  121 AKRRELAEHE WARLKANDSL ECRNCHNFDY MDFTRQSTRA ANMHSTSLAS GEKTCIDCHK 180
  181 GIAHHLPDMK GVEGF

Type	Start	End	Confidence
Cytoplasmic	1	16	0.95
Transmembrane Helix	17	39	0.90
Non-Cytoplasmic	40	195	0.98