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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|78367318, gi|...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.79
Topology Confidence: 0.36
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFNLPIGLRT KVAVLSLFLL CLPWLGYQYV WEMEKYLRHG QEKTLEGTTQ ALATALHERP  60
   61 KLFDKQASFL SQVKKGRDLY AYPLTGPIHL DGKLGEWASN RHRAVTYGAD HQLFKADDGK 120
  121 PLNISFTHMV GKYAGYLYGY FEVTDPKVIY RGTNSLRIDN NDHLAIATLA PDGQFRRYIV 180
  181 ATIRDGWISA FELPADPRKS QPVTPEVRIQ GKWLKTEKGY NIELRMPLEM VGSKLGFAIV 240
  241 DVNDRKARNV EAIVGTSATD DVTKLGTVLV PSPEIESIIK GMSHNSSRIW VVDRHGRVLA 300
  301 KSGDIYSSTN VWAQTATEQT PDTFWGRFKQ QFLHPLYYRI LTTPPKHFVD SLKDSTVLEG 360
  361 SHIRKALAGQ FGSTWRLSPD GKAVILAAAS PIWIDDTVMG VVIAEETTHG IRTLRNKALE 420
  421 KLFNVILTVM SMGTLALFFF ASSISSRIRK LRDDAEQAID SQGRIRKAIV GSKVRDEIGD 480
  481 LSRSFASIVG RLSQYTHYLE NMSSRLGHEL RTPVAVVRSS LEHLNSQDLP PQHQKYVDRA 540
  541 HEGVSRLNMI LNNMSEATRL EEALTDAEVD NFPLSKVISG CMQGYQMTYA NQVFELEIDK 600
  601 EPMTMRGVPE YIAQLMDKLI ANAIEFSQSD TPIKVSLKAK GRQALLSVSN LGPSLPANMG 660
  661 EQIFESMVSV RAQKAQDKPH LGLGLYIARL ITDFHKGSIR AENLMQDGQA TGVVIHIRLP 720
  721 LEA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle