YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|78367081, gi\|...
Protein type:	Transmembrane with Signal Peptide
Type Confidence:	0.99
Topology Confidence:	0.92
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKLLIALVT LVPSLAFAAG GAHVHLESAN VDLKDKESLQ RGLDTFQHYC SGCHSTQYQR  60
   61 YNRVAEDLGI SVDDMRNKYM LNGDAKVGDL MENAIPEVDA AKWFGAAPPD LTLVARVRGE 120
  121 DWIYTYLKSF YKDETRPFGV NNTVFPSVAM PHVLQELQGL QVKQEDGSFV ATGGKLTAEE 180
  181 YDQVVRDITG FLVYSGEPVK LERESLGWWV MGFLFIFFIV AYLLKKEYWK DVH

Type	Start	End	Confidence
Signal Peptide	1	18	0.99
N-region	1	9
H-region	10	15
C-region	16	18
Cleavage Site	18	19
Non-Cytoplasmic	19	204	0.99
Transmembrane Helix	205	224	0.94
Cytoplasmic	225	233	0.92