YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|78361462, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTKFVMAKFV MAKSSVLVVA LALVGCASTN QKPIADDPYY APVYPEAPPT KIAATGSMYQ  60
   61 DSQASSLYSD IKALKVGDII TVILQESTKA KKSANNELKK GSDLTLDPIY AGGGNVTISG 120
  121 SPIDLRYKDS MNTKRESDAD QSNSLSGSIS ANVMQVLNNG NLVIRGEKWI TINNGDEFVR 180
  181 LTGIVRSQDI RPDNTIDSQR VANARIQYSG TGTFADAQKV GWLSQFFMSD WWPF

Type	Start	End	Confidence
Signal Peptide	1	29	0.98
N-region	1	20
H-region	21	26
C-region	27	29
Cleavage Site	29	30
Non-Cytoplasmic	30	234	0.99