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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|126637606, gi...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.58
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDLKATLGQI KQVKPANFKG IGTPILVLAA LAMIVLPMPA FLLDILFSFN IALALVVLLV  60
   61 AIYTDRPLDF AAFPTVLLVA TLLRLALNVA STRIVLLEGH NGGDAAGKVI EAFGSVVIGG 120
  121 NYAVGLVVFL ILIIINFAVV TKGAGRISEV SARFTLDAMP GKQMAIDADL NAGILNQDQA 180
  181 RIRRAEVTKE ADFYGAMDGA SKFVKGDAIA GIMILVINIL GGFVIGMAQH GLDFSSAVEI 240
  241 YTLLTIGDGL VAQIPGLLLS IAAALMVTRQ NESGDMGQMV MSQMFDNPKS LAIAAGVLLT 300
  301 MGIVPGMPHF AFLSFGLITA GGAYFLHRKK DLDRQRALEI AKSSPATPGD AKPKELSWDD 360
  361 VQQVDTIGLE VGYRLIPLVD KGQGGELLGR IKGVRKKLSQ ELGFLVPAVH IRDNLDLAPN 420
  421 TYRISLMGVA SGEADIRHDC ELAINPGQVY GKLDGVETTD PAFGLEAVWI APELREHAQT 480
  481 LGYTVVDAAT VVATHLSQLL TNNASKLLGY EEVQQLMDML AKHSPKLVSG FIPDVLPLGT 540
  541 VVKVMQNLLN EGVSIRDLKT IVQTLLEYGP KSNDTEVLTA AVRIALKRMI VQEISGPEPE 600
  601 IPVITLAPEL EQMLHQSMQA TGGEGPNIEP SLAERMQKSL LDASQRQEMV GQPAILLTSG 660
  661 MLRSTLSRFV KHTIPNLRVI SYQEVPDEKQ IRIVSAVGQ

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle