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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|78366316, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.36
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDMSRLRTFR SRIIVQIALP LIAIMAMVLS LIAWFNYRAE ESYLYGDLEK QAEMVASRVH  60
   61 HFLSFAEEDT RTFADLLGQM SRDQLVHQDG ELKALLTRRL ERQSDFYASA IAFRPSLTPN 120
  121 QQPYAPYVYR DQDGVKFLDI GADSYDYTDG QWAWWSEAID KPQGYWSLPY FDEGAGNILM 180
  181 ITFSHPFGPS SPYWGVVTVD LALDALPAMA GIDADRMLVL DDKGRLIYHK DAQLLMSQGT 240
  241 DKWLAPSNDN GDFITLLQSA KSGNSRMLAA DGQAYLASVG VVPKLNWRVV IMTQEDKLSH 300
  301 QLYMGLSSLV LTLLLISAVL YLTGYLTARR LSLPIERLAA GIVAFGAGKT KHIEGTRGAV 360
  361 TEVETLTDKF NELAEVLAQR EQALLDSRGN RFAKLIDGMS DKSFYCSLEP DGQIAQVSAG 420
  421 VEKVLGVSPD LLKRKYQRMF SDNPINEANW EYMDSALQGN SVPPHQVEMI AANGSVRRLD 480
  481 LFMQPLLSDN GELLSIEMLF NDVTEQFSAA AWSNAVLESA PEAMLIVDEQ GQVVFSNSRC 540
  541 QQLFGYDAQQ MLALNVDQLV PDSVKHHEAL RAKFIGEGVD RRMGLGLGKT LKAKKADGSL 600
  601 FPVEISLGLL PADSDGLRQV AASIRDMTEE LATAKRIKDS ESRFRGLVGN IPGAVYRTRL 660
  661 GEQWVMEYVS DNIAEITGYP AADFIENKKR VFASLILEAD REATDTAINK GIAEQQSFEV 720
  721 QYRIQHRDGS LRWVHEKGKA SYDDEGNALW FDGSIQDVTQ SKLAQEKIAQ SQQQLETITE 780
  781 SIPNTVYQLR WIANDQRYFT FLSRACITTL GFHRDQLLAN FDLVADCIIE SERARIIRAL 840
  841 SGESASGLKW IEEFRYQHPT GEQRWLQAGA RGDRQDDGSI VWNGYLMDIS ERKQMDRELA 900
  901 KREAHFRALF DNAGIGIVNV DDRGVILDCN EQFSQYLQLP IERLKGSLFF DYQDPEQGLE 960
  961 AKNSFKHLMG DGADSVKLEI RLLNQAGEAR WMDVNMTGLS DKQGEYRSAV LSMADISSLK1020
 1021 LLSEELTQAK DVADAASKAK SDFLANMSHE IRTPMNAIIG MSQLCLQTSL DKKQQNYVEK1080
 1081 IDRASKSLLG IINDILDFSK IEAGKLDIEA VPFQLDTMLE DLSDMFSVKA ADKQLELLFA1140
 1141 VAPNIPRHLV GDPLRLSQVL INLMNNAIKF TEQGEVMLSI SQLVREDEEI LLKFSVRDNG1200
 1201 IGLTEEQRGK LFQSFSQADS STTRKYGGTG LGLAICKQLV ELMGGEIGVE SQFGNGSTFF1260
 1261 FSVRFKVADN QLIKVAQELE GMRILVADDN ATARDILRST LESMGFTVDT VRSGAEALSR1320
 1321 CQETDYGVAL IDWRMPEMDG LETARRLLSE RTNPPKTLIV SAHADGDFID KAEQAEISGY1380
 1381 ITKPISASRL LDGIMSALGK QGAMPVRRKG SEVSPALLAQ LKGKRILLVE DNEMNQEVAS1440
 1441 EFLEQVGVIL SIAENGQVAL EKLAMQSFDL VLMDCQMPVM DGYQATAELR KRPELADLPV1500
 1501 IAMTANAMAG DKEMCLRAGM NDHIAKPIEV SLLYKTLLEY LGDDSQVIEE TSTEQTDQHS1560
 1561 QDAYWPQHPA LDIDKGLQLV QNSARLYRRI FERFYTGQSR CAELIATAQR EGKQEEAVRY1620
 1621 AHTLKGVAGN LCCPELVALA KQVEQTLSDS IEADVTEALT QMGELLDSLC TTIGDWLSQT1680
 1681 GAETLPQEDG AEAGATADAP PMSAQELDAA IKELLKMLEE ADAEAVEKLQ AIRDRLPTSL1740
 1741 ANKIAPVLNM VNAYQFDEAI ELVEEIFS

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