YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|126639837, gi...
Protein type:	Transmembrane
Type Confidence:	0.76
Topology Confidence:	0.69
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSKRRLGLNL KGRHRSAGMT LLEVIVALMV FAIAAVSITK SLGEQMANMP ILEERTLAQW  60
   61 VASNQMVDAR LEKKFPDLGR KDGSVELAGK EWYWRKEVVK TTDDNFRMIR ISVSDDERYK 120
  121 RIIAQVSSYV LKQD

Type	Start	End	Confidence
Cytoplasmic	1	18	0.69
Transmembrane Helix	19	38	0.71
Non-Cytoplasmic	39	134	0.97