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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|78365731, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.96
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDILRAGQSA LANIIMQRKG ELVKSFVALL TAIMSLLSAS SWADDTELYV YEASARTGAR  60
   61 PQILIIFDNS GSMSTKVYDV DKPYTPGAGG GSRYNNGKKG MLYYVKGDQG KNKLPDPDDP 120
  121 NERRKFSGTI NSCGSSWEFL NDYGIFTGFF RKYTFSGANG AWREFGDNNG LNAKAVDCYE 180
  181 DIQEGNYLNA KGLTSGLPVD SLGSPTTPIM YNNVSSSSSD SIKKTAKEQA QLTGFGTGRV 240
  241 LTVYTEDYLR WHHNANKKQE DKTRLELAKD AIKNVILTTP GVDFGLAIFN MNGPDDTLYN 300
  301 GRNGGRIIKA IQTLTPGQKK TLLSGVKDIE YGWNTPLCET LYEAYRYFAG KSVEFGDDDK 360
  361 DYTYESWGRW VTYRANKNDS LDKDALVKGT NTYQSPFKKC QNNAYIVFIT DGEPTLDSAA 420
  421 DVEVTKLTGG VDKHSTSYMS ALSSWMYRKD VNPNMDGDQH VITHTIGFSE GAKNAEDLLK 480
  481 KVASKGGGSY FDATDATKLQ GSIQQAVNEV LANSASFTSP SVASNNFNRT QTFNYAYYSM 540
  541 FLPDRGPRWT GNIKKFRVAA DGTVLDAEGK IALGDDGNIK DSACSYWTPK KLCGDGNDVR 600
  601 KGGVLSAMQS ADSRTLYSNL GGGMDTLSLS AAATKAGGQE DLANFMGVDK SQLTNLFDWA 660
  661 KGLDVDNDKN QTTIADPAKN WRNDIMGDAL HSKPLALNFG SKSSPDIRIL VGTNHGFMHM 720
  721 FKDDTTANEV SESWAFMPYE LLPNIQTLRN NVPTGVHSVY GIDGSPVAYV KNGASGVEKA 780
  781 WLFFGMRRGG DSYYALDISN PDSPSFKWRI DASSPGLSEL GQSWSTPVVT TIRSASGTEK 840
  841 PVLIFGAGYS PAGKDGKDLG TKDNKGRGVF IVDADTGKLI HQFGAGGGTA LPGIQDSIPS 900
  901 GVAVLDASGD GNTDRIYAVD TGGSVWRMDM PRADKASWSA FKFADLGGKS LLQNRRFYSA 960
  961 PVVAQTMINN VSVVDYTVNG KTTRVTTSQN VPYDAVVVGS GHRAAPSDTS REDMFFTLQD1020
 1021 RNVVTQTFGG TGRPKAPAPL TLSDLYETTK LKANQAPDKI AISKKRGWYF KLPGLGEKNL1080
 1081 SPATIINGQV FFTTFVPGTA ASNNQCLTSG MGFLYPFNLH YGTSNYTSVA LEAGNLVLDT1140
 1141 PQLVIPADNK GGQGKDGDAY MYLIGIGNAA EKMEKVKPDD DCPAGDNRCI GGRLRAHKIY1200
 1201 YYSE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle