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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|78365444, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTAMKTITPL LVLMLAACQT TDRPQPVESK SAIDSSIAAA QNKPQMPPPA AVMPDSVQRE  60
   61 LQSSALLGSL TPSQPSERRF DVSAKDVDAK VFFPSLVQGT PLSVAVHPNV TGTVSLSLKG 120
  121 VTLSEALQVV EDIYGYEVSR EGRILRVFPA GMRTETFPLN YLYMERQGLS LTSVNSGRIS 180
  181 DNNNNRNNNG NNGNNSNNYN NNNSNNNGGD SNSNNSNETT NGTFIRSKTK TDFWGELKET 240
  241 LESIIGNTGD GRQVVVSPQA GLVTIRAYPN ELRQVKTFLK TAESHLQRQV ILEAKVLEVT 300
  301 LSDGYQQGIH WESVLGQSGN NSIEFGTSPA PDGLGDVITS AIGGITSLQI KGKDFSTMIN 360
  361 LLDTQGDVDV LSSPRVTASN NQKAVIKVGR DEYFVTDVSS TTVAGTTPVT TPEVELTPFF 420
  421 SGIALDVTPQ IDEEGSVLLH IHPSVIDIKE QNKSIKVSDS TLELPLAQSE IRESDTVIKA 480
  481 NTGDVVVIGG LMKSENIELI SKVPLLGDIP FLGEAFTNRS NSLRKTELVI LLKPTVVGAE 540
  541 TWQTELQRSK ALLDRWYPEE KQE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle