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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|126636688, gi...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.52
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKSTEPDLQL KSPIQKNYNR AVFYTYIGVI IMALLTAWIF FERQKTQMMD QREELVERHV  60
   61 LQIDLLLESS IRAVKSLRNV AVDHLRLGEL VRTDRLPQYE KFNESGQFFT LEPSYAQSGK 120
  121 PFTNMGRITG AGSLNGRSDK FYQELEMLFE LSLSFPVARQ AAPKASSIYY ISKHRMMSYY 180
  181 PWPSDEQRFR DELLKKQQFQ LVTPAMNPQR SVAWSPAYVE PNGKGLLTTV GVPIYLEDEF 240
  241 IGSINLDMTL SSLDKQIRLY FKMPGTVILL DQQNNILSHS DIDAADINRV FHISQKIPSA 300
  301 LHSVPESELF DAHEGIMRNG YYIHSVALQN APWRLLYLQD ENELFKDSWE KLELTFLLVV 360
  361 IALSVLVTIV HWQTRRSFVN PASRLLSHLE GCSQEPRKPP AKITQGWEPW FQLVSRIFEE 420
  421 NQQYTRHLAE QNRRLDNLVA RRTERLKETT ERREREYALL RSLLDSIPEA IIFKDKEGKY 480
  481 LGCNKSAERM LGYTESEMIG QDSQTMTSNE QSMRIRAEDE RVLSERTPLR YQEKVELAGK 540
  541 PVLLDTLKLP FYNRRGELLG LIAVWRDVTR EYESAEQLRL SEERYHLAMD AVEDGLWDWY 600
  601 LDSEQIICNP AYYSMLGYKS NEFPALVSTI DELVHPDDRI RVQEYREQYL ADPIGAYDVE 660
  661 FRMRGKSGMY HWVLSRGRVV EFTSDNQPKR MVGTHKDITR HKSNEVALLE AKQDAESANL 720
  721 YKSEFLANMS HEIRTPMNAI IGMLQLASRT QLTPQQADYL DKAGFSAQSL LRIINDILDF 780
  781 SKIEAGKLEL ERVAFPLDKV LDHALDLNAL KAQEKGVELL LYAPVTAGLI LEGDPLRLGQ 840
  841 VLINMLSNAV KFTQSGEIEL GCEDVGERDH RITLKFWVRD TGIGISKEQQ ESLFDAFAQA 900
  901 DGSTTRKYGG TGLGLSISKH LVSMMGGTMQ VQSELGVGST FSFTISFEIA EEAEVKPLIV 960
  961 PEVIGNLKTL VVDDNPTALQ IYSTAMRDFH FDVDTASNGA EALYKLEHRP VDLLLLDWMM1020
 1021 PEMDGVEVIK ALDAMVADGR LEKRPVIIMM TAYASEPLKE DLDDLDIYAM LQKPFKASAL1080
 1081 FDEIIAAFID KPKINPAAAL PVEGNATGTG QILLVEDNFI NQQVATELLK SAGYEVDVAE1140
 1141 NGQVALDMVD AKQYDAVLMD IQMPVMDGLT ATKELRKRYT KEELPVIAMT AHAMSGDREK1200
 1201 SLAAGMNAHI TKPIVLNELF DTLAQWIVRH 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle