YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|77974387
Protein type:	Globular with Signal Peptide
Type Confidence:	0.97
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRKIAPFFAM IMFAMIMCLP VVSFTSSASE PVAVSKDLKQ QLLGSSVYIQ IFKEERTLEL  60
   61 YARLQGEYRL VQSYRICEFS GGLGPKRREG DFKSPEGFYT IDMRHLKPDS KFYRAINIGF 120
  121 PNDYDKSQGY SGKYLMIHGA CKSIGCYAMT DAYMDEIFNY VQTAFIFGQE KVDISIYPFR 180
  181 MTEQNMQRHR NSSDYNFWRQ LQPGYAYFAK NRMPPSVSVI NGQYVLSRPP VSSEPVSQYA 240
  241 STKSSSMLQS NTLAKTE

Type	Start	End	Confidence
Signal Peptide	1	28	0.95
N-region	1	19
H-region	20	25
C-region	26	28
Cleavage Site	28	29
Non-Cytoplasmic	29	257	0.99