YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|77974380, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.74
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMAAVGFLLL TGCGPEQINL EGKTMGTSYS IKYVSDSSAP SPEKLQQEID RELEQVNDQM  60
   61 STYRPNSELS RFNKSQKVDT PFPVSVATAK VVREAIRINR LTDGALDVTV GPLVNLWGFG 120
  121 PEGRPNVVPT EAEIAKKREW VGIDNLAVEN GALIKHIPEL YVDLSAIAKG YGVDVVAEYL 180
  181 ASQNIDNYMV DIGGEVRTHG NNGENKPWRI AIEKPVVGST QSAQEIIEPG SMAIATSGDY 240
  241 RNYFEQDGVR YSHTIDPETG RPINHRLVSI TVLDPSCMTA DGLSTGLGVL GPERGMALAN 300
  301 LLGIPVFMIV KTDKGFEEHH SESFKPYLKQ RP

Type	Start	End	Confidence
Signal Peptide	1	15	0.75
N-region	1	6
H-region	7	12
C-region	13	15
Cleavage Site	15	16
Non-Cytoplasmic	16	332	0.99