YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|238790269, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.66
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNRRHFFKLA SGGVLLAGLS PSTKAEVQNR PPIPGSLGML YDSTLCVGCQ ACVSKCQQIN  60
   61 HSEIYASGEA VWSENDKLSP FTNNIIQVWT SGTGVNKDQL EDGYAYIKKQ CMHCVDPNCV 120
  121 SVCPVSALRK DAKTGIVHYD PDVCTGCRYC MVGCPFNVPK YDYDNPFGKI HKCELCNQKG 180
  181 VERLDKGGLP GCVEVCPTGA VIFGTREELL SEAQRRLTLT PGENYRFPRQ TLSANDTYEH 240
  241 PVPHYDKHVY GEKEGGGTQV LVLAGIPAEK LDLPPLAELA TGARSEHVQH TLYKGMILPL 300
  301 AVLAGVTALV HRNTRAERKD ADHDEDKKHH DESDRQDKKE GPDDDA

Type	Start	End	Confidence
Signal Peptide	1	25	0.99
N-region	1	16
H-region	17	22
C-region	23	25
Cleavage Site	25	26
Non-Cytoplasmic	26	346	0.94