YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|238723120, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKSLVKVSLA ALTLAFAVSS HAAEKELIVA TDTAFVPFEF KQGDKYVGFD IDLWDAIAKK  60
   61 LDLKYTLKPM DFSGIIPALQ TKNVDLALAG ITITDERKKA VDFSDGYYNS GLLVMVKADN 120
  121 NDIKGEADLA GKVLAVKSGT GSVDYAKANI KTKDLRQFPN IDNAYLELGT GRADAVLHDT 180
  181 PNILYFIKTA GNGQFKAVGE SIKAQQYGVA FPQGSDLREK VNAALKSLKE DGTYAAIYKK 240
  241 WFGVEPK

Type	Start	End	Confidence
Signal Peptide	1	22	0.99
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	247	0.99