YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|238728942, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.86
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRIRHRLCRF RKNKHLRHQR FRSRIFHRDS AATAEMKKPF VVVLTGAGIS AESGIRTFRA  60
   61 ADGLWEEHQV EDVATPEGYR RDPELVQAFY NARRRQLQQP EIAPNAAHKA LADLEAVLGD 120
  121 NFVLITQNID NLHERAGSKR VIHMHGELLK VRCTQSGQVL EWPGDLSADE RCHCCQFPSP 180
  181 LRPHIVWFGE MPMGMDDIYQ ALADADFFIS IGTSGHVYPA AGFVHESRLH GAHTVELNLE 240
  241 PSQVESQFDE KHYGLASKVV PEYVREFLTT RGENRQGGSG N

Type	Start	End	Confidence
Signal Peptide	1	53	0.84
N-region	1	44
H-region	45	50
C-region	51	53
Cleavage Site	53	54
Non-Cytoplasmic	54	281	0.99