YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|77979904
Protein type:	Globular with Signal Peptide
Type Confidence:	0.93
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTVGVFMGFS MVRRRVVLGM VAVALATGLN VKSYAAGDLL SQVKDRGTLI VGLEGTYPPF  60
   61 SFQGEDGKLT GFEVDFANAL AEHMGVKAKI TPTKWDGMLA SLESKRIDVA INQVTISEER 120
  121 KKKYDFSTPY TISGIQVLTK KGNEGNFTKP EDLEGKKVGV GLGSNYEQWL RDNLKGVDIR 180
  181 TYDDDPTKYQ DLRVGRTDAI LVDRLAALDL VKKTGGTLAV AGSAFARQES GVALRKNNPE 240
  241 LLAAINQAIT EMQKDGTLAK ISEKYFGADV TK

Type	Start	End	Confidence
Signal Peptide	1	35	0.91
N-region	1	26
H-region	27	32
C-region	33	35
Cleavage Site	35	36
Non-Cytoplasmic	36	272	0.99