YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|238729348, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.53
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKSTTMSHLR QWKQEKRKFA TLTAYDASFA QLFAEQGIEV LLVGDSLGMT LQGFDSTLPV  60
   61 TTADVAYHTR AVRRGAPHCL LLADMPFMSY ATPEHTFINA AELMRAGANM VKLEGGSWLC 120
  121 DTVRMLAERA VPVCGHLGLT PQSVNIFGGY KVQGREEVAA NQLLKDALAL ENAGAQLLVL 180
  181 ECVPVELAKR VSEELAIPVI GIGAGNVTDG QILVMHDALG ITGGHTPKFS KNFLAQSAGD 240
  241 IRAAIKLYIQ EVESGAYPAE EHTFQ

Type	Start	End	Confidence
Signal Peptide	1	30	0.53
N-region	1	21
H-region	22	27
C-region	28	30
Cleavage Site	30	31
Non-Cytoplasmic	31	265	0.99