YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|77979400
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.91
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSHPTSSHPT TTHGGASHGS LKSYLIGFIL SVILTVIPFA MVMSGTASHT TILATVVGLA  60
   61 VVQIIVHLVY FLHMNGSSEE RWNLVAFLFT AMIIAIVVVG SLWIMYNLNI NMMVD

Type	Start	End	Confidence
Cytoplasmic	1	20	0.92
Transmembrane Helix	21	42	0.93
Non-Cytoplasmic	43	50	0.71
Transmembrane Helix	51	72	0.94
Cytoplasmic	73	83	0.81
Transmembrane Helix	84	106	0.93
Non-Cytoplasmic	107	115	0.91