YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|238791921, gi...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.85
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQPLNGPGVP IASDRNIAPT KVPHQGQVED QALTPAQRTT LEKLIVRIMA LSPIKSAEIW  60
   61 AGLRHDLSLG STSDLLARHF QPAEQLLQTR LAQAQENHAN HQLRQQLTEL LPQGNNRQAV 120
  121 SDFIRQHFGH TVLSQLSHAE LQQVLVLLQS GTLNIPQPQL ATITDRPLLP AEHQNIQSLV 180
  181 AKLSAATGEQ PAKIWQALFD MVGVKSNDPL PARHFQLLSQ FLQTKVALSQ QTAPTLVNLQ 240
  241 TALKQPADAQ EQQLLIDYSQ NRFQASPTTP LTQAQLNDII NVLFTARLDR ANAAQRLAED 300
  301 QKTLQPVINP LIAALPQSLQ PLLQKPSLAF VALIIVMAFL LAIFL

Type	Start	End	Confidence
Non-Cytoplasmic	1	325	0.85
Transmembrane Helix	326	344	0.95
Cytoplasmic	345	345	0.85