YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|77978909, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRKSLLLLPV LIAAFAGPVN ADDAAIQQTL KKLDIQQADV QPSPIPGLST VMTESGVLYI  60
   61 SADGKHLLQG PLYDVSGSQP VNITNQMLVK KLEALSSEMI VYKAPQEKHV VTVFTDITCG 120
  121 YCHKLHEQMK DYNALGITVR YLAFPRQGLS SQAEKDMRSI WCMADRNKAF DDAMKGTEVS 180
  181 PATCKTDISK HYQLGVQFGI QGTPAIVLQN GTIVPGYLEP KEMLAMLNKH QASLKAAG

Type	Start	End	Confidence
Signal Peptide	1	21	0.99
N-region	1	12
H-region	13	18
C-region	19	21
Cleavage Site	21	22
Non-Cytoplasmic	22	238	0.99