YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|238727245, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.75
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTKLKAVIPV AGLGMRMLPA TKAIPKEMLP IVDKPLIQYV VNECVAAGIK EIILITHSSK  60
   61 NAVENHFDTS YELEAMLEAR VKRQLLDEVQ SICPPGVTIM HIRQGHPEGL GHAVLCAKPL 120
  121 VGDSPFAVLL PDVLIDDAKS DLTRDNLAQL VKRFEESGTS QVLVHAVEPE ALSNYSVISC 180
  181 EVSDLAPGES SRINAMVEKP QSPADLKSNL SAVGRYVLSA DIWPMLEKTK PGAWGRIQLT 240
  241 DAIDALAAEK PVDAVALTGQ SYNCGEKLGY MKAYVAYGLR HPKQGAEFKA WLKEFVA

Type	Start	End	Confidence
Signal Peptide	1	23	0.72
N-region	1	14
H-region	15	20
C-region	21	23
Cleavage Site	23	24
Non-Cytoplasmic	24	297	0.99