YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|77978752, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.85
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRNFLSHSKN SLSGSSTKPR KLTEADVTPE SIFYQRRKVL QALGITAATL ALPTSAQADL  60
   61 LAWFKGNDRP KAPSGKPLTF TKSTVYHPDL AMTPEEKVTG YNNFYEFGLD KADPAANAGT 120
  121 LKTEGWQIRI DGDVAKPMTL DIDDLIKRFP LEERIYRMRC VEAWSMVVPW IGFELGKLLK 180
  181 LVEPTSNARY VAFQTLYAPD QMPGQEDRFI GGGLKYPYVE GLRLDEAMHP LAFMTLGVYG 240
  241 KALPPQNGAP LRLITPWKYG FKGIKSIVHI RLTHDEPPTT WNLSAPNEYG FYANVNPHVD 300
  301 HPRWSQATER FIGSGGILDV QRQPTLLFNG YADQVASLYR GLDLRVNF

Type	Start	End	Confidence
Signal Peptide	1	58	0.85
N-region	1	49
H-region	50	55
C-region	56	58
Cleavage Site	58	59
Non-Cytoplasmic	59	348	0.99