YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|77978747
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.52
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNRYSSNGRW VIWLSFLIAM VLQIMPWPEQ IYMFRPSWLA LVLIYWVMAL PHRVNVGTGF  60
   61 VLGLIMDLIL GSTLGVRALA LSIIAYLVAF KFQLFRNMAL WQQALIVMLL SLTMDVVVFW 120
  121 SEFLVINVSF RPEVFWSSVI NGILWPWLFL LMRKIRRQFA VQ

Type	Start	End	Confidence
Cytoplasmic	1	8	0.52
Transmembrane Helix	9	28	0.89
Non-Cytoplasmic	29	67	0.47
Transmembrane Helix	68	90	0.82
Cytoplasmic	91	99	0.76
Transmembrane Helix	100	121	0.87
Non-Cytoplasmic	122	133	0.68
Transmembrane Helix	134	151	0.95
Cytoplasmic	152	162	0.85