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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|77978689, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.72
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDRKSLDQAA TLAGIAASYI NAHGKPQAIL PETKQQLLAA MGRTYVPQDT QTESAPLPVV  60
   61 KVFTFGSPMQ LPMAGSGDYH WQLQTEKGEL HQGRISAKKT LTLPSSLPQG YHRLILEQGL 120
  121 QQWQCSIIVA PKRCYEPDAL LAGKKLWGAC VQLYTLRSER NWGIGDFGDL SQMLEQVGER 180
  181 GGAFIGLNPI HALYPANPQS ASPYSPSSRR WLNVVYIDVN RVDEFQHSEA AQLWWHQPET 240
  241 QQVLAEVRAN EWVDYPQVMQ LKLMALRLAF PLFTARKAKD ARMQAFHQFV EQGGRSLHQQ 300
  301 AAFDALHAHL SAQDPMMWGW PVWPEKYRDG HSTAVADFCR EYASDVTFYL WLQWLAATQF 360
  361 DSCFRNSQSR KMPIGLYRDL AVGVAEGGAE TWCDRELYCL KASVGAPPDI LGPLGQNWGL 420
  421 PPMDPHVMVA RAYQPFIDLL RANMTSCGAL RIDHVMALLR LWWIPYGQTA AQGAYVKYPV 480
  481 DDLLAILALE SQRHHCMVIG EDLGTVPVEI VAKLRDSGVY SYKVLYFEHD SENTFRAPQS 540
  541 YPAQAMATIT THDLPTLRGY WQSDDLTLGN KLGLYPDQQI LKQLYLDRER AKQGLLEGLH 600
  601 HYGCLPKRVG HKASLLSMSP VLNRGLQRYV ADSASALLGL QPEDWLDMAT PVNIPGTSEE 660
  661 YPNWRRKLTT TLEEMFADSQ INRLLKDLDK RRKNVSAG

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle