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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|77978478
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.68
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTPGELRRLY LIIRVFLSYG LDELIPNIRL TLPLRLGRHL FFWLPNRNKD KPLGERLRLA  60
   61 LQELGPVWIK FGQMMSTRRD LFPPAIADQL ALLQDRVAPF DGALARKHIE IAMGGPLETW 120
  121 FDDFDQQALA SASIAQVHTA RLKENGQEVV LKVIRPDILP IIKADVRLMY RLAGWVPKLL 180
  181 PDGRRLRPRE VVREYEKTLL DELNLLREAA NAIQLRRNFE DSPMLYIPEV YSDYCRESVL 240
  241 VMERIYGIPV SDIAALEDQG TNMKLLAERG VQVFFTQVFR DSFFHADMHP GNIFVSYEHP 300
  301 HDPLYIGIDC GIVGSLNKAD KRYLAENFIA FFNRDYRRVA ELHVDSGWVP RDTNVEDFEF 360
  361 AIRTVCEPIF EKPLAEISFG HVLLNLFNTA RRFNMEVQPQ LVLLQKTLLY VEGLGRQLYP 420
  421 QLDLWTTAKP FLESWLRDQV GLPAVIRALK EKAPFWAEKF PELPELVYDS LQQHKFLQQS 480
  481 VDKLTTQMQG QQQRQGQSRY LFGVGATLLV SGTILFLADA VEISAGFMIA GVLAWFVGWR 540
  541 RTS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle