YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|77978215, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEKWMKSLFK VTLLATTMAL TLNTSATFAA EAAKTAAAPA TTNSAFKNDD QQSAYALGAS  60
   61 LGRYMDNSLK EQEKLGIKLD KDQLIAGVQD AFASKSKLTD EEIEKTLQGF EARVKASAQA 120
  121 KMEQDAKENA DKGTKYRDTF AKEKDVKKTA SGLLYKVEKA GTGDALKDSD TVVVNYKGTL 180
  181 TDGTEFDNSY KRGEPLSFRL DGVIPGWTEG LKQIKKGGKI TLVIPPELAY GKTGVPGIPA 240
  241 NSTLVFDVEL LDVKAAPKAD APEEQPAVAA GEKAKK

Type	Start	End	Confidence
Signal Peptide	1	32	0.95
N-region	1	23
H-region	24	29
C-region	30	32
Cleavage Site	32	33
Non-Cytoplasmic	33	276	0.99