YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|77978029
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALNAGLILS FSLYSSLATA GFEVVALGVD GGVSDGNLTS YLIRDDSQPV YLALDAGSVL  60
   61 PGIAKALEKG AFPEITDETA APLTRQGYIF RQRINSYFLS HAHLDHVSGL IIGSPQDSKK 120
  121 TIYASADTID VLRNYYFNWR VWPNFTDSGS GTRLGTYRMQ MVRPNQPLSL GLTRLTGEMY 180
  181 PLSHDKSPSS MLLISSNNQS FAYFGDTGPD EMEKSKNLDT VWRNLAEKVK QQQLKGMIIE 240
  241 VSFPNDVADN QLYGHMTPKW LLKELKNLEK YSGEGQPLKG LPVVISHIKP SFQQGQDVRK 300
  301 TIAAELQQGN DMGVDFILME QGDSQRF

Type	Start	End	Confidence
Signal Peptide	1	20	0.97
N-region	1	11
H-region	12	17
C-region	18	20
Cleavage Site	20	21
Non-Cytoplasmic	21	327	0.99