YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|77977684
Protein type:	Globular with Signal Peptide
Type Confidence:	0.71
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPTAMAGTWS VGASALVSPD PYRGKNDRVY PVPIISYESD NFYFRTLAAG YYLWKDDNNR  60
   61 LSIDAYYLPL NFKPGDSNDQ QMKQLDKRRS TMMAGMSYSH IEDWGTLRAM FSGDVLDNSG 120
  121 GFVGDLAYLY RFNVDSWTLT PGVGVSWNSE DQNNYYYGVS RGESARSGLA QYSPNDSWSS 180
  181 YMELTANYNI NPNWNAFFTG RYIRLANEVK NSPMVDASWT GVLWTGVTYT FR

Type	Start	End	Confidence
Signal Peptide	1	15	0.71
N-region	1	6
H-region	7	12
C-region	13	15
Cleavage Site	15	16
Non-Cytoplasmic	16	232	0.99