YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|77977642, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.88
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKIVVLLSG QGSNLQALID AQQQGRISGT ISAVFSNNPD AYGLERAELA GIPHHAVDAK  60
   61 SYADRASFDL ALAQAIDHYQ PDLLVLAGYM RILSAEFVQH YAGRMLNIHP SLLPKYPGLH 120
  121 THRQALENGD QEHGTSVHFV TEELDGGPVI LQAKVPIFSE DSEEDVVERV QTQEHSIYPL 180
  181 VVSWFTDGRL AMRDNAAWLD GKRLPAQGYA AE

Type	Start	End	Confidence
Signal Peptide	1	17	0.87
N-region	1	8
H-region	9	14
C-region	15	17
Cleavage Site	17	18
Non-Cytoplasmic	18	212	0.99