YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|238729300, gi...
Protein type: Transmembrane
Type Confidence: 0.70
Topology Confidence: 0.66
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKAARPGKLK RQEEQASFIS WRFALLCGCI LLALVGLMLR TAYLQVINPD KLVREGDMRS  60
   61 LRVQEVPTAR GMISDRSGRP LAVSVPVNAV WADPKELTER GGITLDTRWK ALSDALEIPL 120
  121 DQLATRINAN PKGRFVYLAR QVNPAIGDYI HKLKLPGIYL RQESRRYYPA GQVMAHIIGV 180
  181 TNIDGQGIEG VEKSFDRWLT GQPGERTVRK DRYGRVIEDI SSVDSQAAHN LVLSVDERLQ 240
  241 ALVYRELNNA VAFNKAESGT AVLVDVSTGE VLAMANSPSY NPNNLTGTPK DAMRNRAITD 300
  301 IFEPGSTVKP MVVMTALQHG VVKENSVLNT LPYFVNGHQI KDVARYAELS VTGILQKSSN 360
  361 VGVSKLALAM PSSALVDTYS RFGFGKATNL GLVGESSGLY PKKQRWSDIE RATFSFGYGL 420
  421 MVTPLQLARV YATIGSMGIY RPLSITKVDP PVAGERIFPE PLVRTVVHMM ESVALPGGGG 480
  481 TKAAIKGYRI AIKTGTAKKV GPDGKYMDRY LAYTAGVAPA SNPRFALVVV INDPQAGKYY 540
  541 GGAVSAPVFG AIMGGVLRTM NIEPDALPTG DKSELVINTK EGSGGRS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle