YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|238794391, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.60
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNTINASMTV IGAGSYGTAL AITLARNGHQ VVLWGHDPKH IQVLQRDRCN QAFLPDVPFP  60
   61 DTLLLETDLA RALAASRDVL VVVPSHVFGA VLHQLKPHLR KDARIVWATK GLEAETGRLL 120
  121 ADVAREVLGE TIPLAVVSGP TFAKELAAGL PTAIALASTD VQFSEDLQQL LHCGKSFRVY 180
  181 SNADFIGVQL GGAVKNVIAI GAGMSDGIGF GANARTALIT RGLAEMTRLG SALGADPSTF 240
  241 MGMAGLGDLV LTCTDNQSRN RRFGIMLGQG LGVQEAQDKI GQVVEGYRNT KEVLALAQRH 300
  301 GVEMPITEQI YQVLYCHKNA REAALTLLGR TKKDEKSGI

Type	Start	End	Confidence
Signal Peptide	1	21	0.61
N-region	1	12
H-region	13	18
C-region	19	21
Cleavage Site	21	22
Non-Cytoplasmic	22	339	0.93