YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|238794403, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.92
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSARKRLSVV MIAKNEASLL ADCLASVSWA DEIVVLDSGS EDETIALAQQ YGAKVYSNAQ  60
   61 WPGYGKQRQL AQQYASGDYI LMLDADERVT PELKTAIEAV LITPEEGAVY SCARRNLFLG 120
  121 RFMRHSGWYP DRVTRLYPHH QFQYNDNLVH ESLNSGSAKV IPLSGDLLHL TCRDFFAFQR 180
  181 KQLSYAEAWA TQRHQQGKSC SYFSILSHTL GAFCKTWLLR AGFLDGKQGL LLAVVNAQYT 240
  241 FNKYAALWAL SHQYQKSENS

Type	Start	End	Confidence
Signal Peptide	1	30	0.94
N-region	1	21
H-region	22	27
C-region	28	30
Cleavage Site	30	31
Non-Cytoplasmic	31	260	0.99