YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|77976302, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.88
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSTTTEVIAH HWAFAVFLIG AIGLCGLMLL GAFFLGGRAR ARAKNVPYES GIDSVGSARM  60
   61 RLSAKFYLVA MFFVIFDVEA LYLYAWSISI RESGWVGFIE ATIFILVLLA GLVYLVRIGA 120
  121 LDWTPTRSNR RVSKPSIVKY ASSPPQDIPK DLGVAGQQQA DGKSVTI

Type	Start	End	Confidence
Non-Cytoplasmic	1	11	0.92
Transmembrane Helix	12	35	0.92
Cytoplasmic	36	65	0.94
Transmembrane Helix	66	86	0.94
Non-Cytoplasmic	87	97	0.80
Transmembrane Helix	98	121	0.88
Cytoplasmic	122	167	0.99