YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|77976015
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.75
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYCPAKRPQS VPVNCAHGIS MQNVTQIIID EQQEREDPSY SFLGGVTGFV FYWLAFAIPF  60
   61 FVYGPNTVFF LLYTWPFFLA LMPVSVLIGI TLSMLSRGNL LVTVGGTGIA VVCLFWMLFS 120
  121 FLTGW

Type	Start	End	Confidence
Cytoplasmic	1	41	0.95
Transmembrane Helix	42	63	0.91
Non-Cytoplasmic	64	70	0.83
Transmembrane Helix	71	92	0.92
Cytoplasmic	93	99	0.81
Transmembrane Helix	100	120	0.95
Non-Cytoplasmic	121	125	0.75