YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|238788325, gi...
Protein type:	Transmembrane
Type Confidence:	0.97
Topology Confidence:	0.38
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTAAQTVTAP DSTAALAAPV AINAPAVNLP VANPPVTAQT PVTGFAASHP GVAAQQTAPA  60
   61 MPAGTVLTQV GSVLGGILLL ILCGAWLVRR LGFAPQARNN KLLNVRASCQ VGQREKVVIV 120
  121 EVDNTWLVLG VTAQNVTQLH TLPRPPVDET STELSPNSAK PADFRQLLNK LLKHPEKSA

Type	Start	End	Confidence
Cytoplasmic	1	12	0.52
Transmembrane Helix	13	27	0.38
Non-Cytoplasmic	28	65	0.72
Transmembrane Helix	66	88	0.89
Cytoplasmic	89	179	0.83