YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|77975692
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGFSMVRRQV VLGMVAVALA TGLNVKSYAA GDLLDQVKER GTLIVGLEGT YPPFSFQGED  60
   61 GKLTGFEVDF ANALAEHMGV KAKITPTKWD GMLASLESKR IDVAINQVTI SEERKKKYDF 120
  121 STPYTISGIQ VLTKKGNEGK FNKPEDLEGK KVGVGLGSNY EQWLRDNLKG VDIRTYDDDP 180
  181 TKYQDLRVGR TDAILVDRLA ALDLVKKTND TLAVAGPAFA RQESGVALRK NNPELLAAIN 240
  241 QAIAEMQKDG TLAKISEKYF GADVTK

Type	Start	End	Confidence
Signal Peptide	1	29	0.96
N-region	1	20
H-region	21	26
C-region	27	29
Cleavage Site	29	30
Non-Cytoplasmic	30	266	0.99