YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|238723276, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.65
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKRLIIGISG ASGAIYGVRL LQVLQHVEGV ETHLILSNAA RQTLALETEF SVKDVQALAD  60
   61 VVHDARDIAA CISSGSFKTS GMVILPCSIK TLSGIVHSYT DGLLTRAADV ILKERRPLVL 120
  121 CVRETPLHLG HLRLMVQAAE LGAVIMPPMP AFYHRPQSIQ DIVDQTVNRI IDQFDIELPK 180
  181 DLFIRWQGSN

Type	Start	End	Confidence
Signal Peptide	1	17	0.62
N-region	1	8
H-region	9	14
C-region	15	17
Cleavage Site	17	18
Non-Cytoplasmic	18	190	0.97