YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|238722962, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.80
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSTKHPVIAV TGSSGAGTTT TSLAFRKIFQ QLNIRAAQIE GDSFHRYTRP EMDAAIRKAR  60
   61 DQGRHISYFG PEANDFGQLE ESVSQYGALG TGRSRKYLHT YDEAVPYNQI PGTFTPWEAL 120
  121 PEPTDVLFYE GLHGGVVTEH HDVAKHVDLL VGVVPIVNLE WIQKLVRDTG ERGHSREAVM 180
  181 DSVVRSMDDY INYITPQFSR THINFQRVPT VDTSNPFAAK AIPSLDESFV VIHFRGLDQI 240
  241 DFPYLLAMLQ GSFISNINTL VVPGGKMGLA MELIMAPLVQ QLLEGKKII

Type	Start	End	Confidence
Signal Peptide	1	24	0.89
N-region	1	15
H-region	16	21
C-region	22	24
Cleavage Site	24	25
Non-Cytoplasmic	25	289	0.97