YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|238722605, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKFGLVVAGI LAVCCSASAI ATTLKLAPEI DLLVVDGKNM SGSLLKGADS LELNSGQHQI  60
   61 LFKVAKALPT DPKILYTSPP LVVVFNTRNI RSVAIKLPTI DTERDGYKFS KNPAYQLIGD 120
  121 NGRPLSVRHD VLHQDNLNSA ATLETAMATY NVGQFSASVP SFATIPPSSV TAVPGTTIAV 180
  181 AGTNTTQKTT NLQGENVAEQ MLQYWFLQAD KETQQRFLLW AKKPPTK

Type	Start	End	Confidence
Signal Peptide	1	21	0.95
N-region	1	12
H-region	13	18
C-region	19	21
Cleavage Site	21	22
Non-Cytoplasmic	22	227	0.99