YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|238721076, gi...
Protein type:	Transmembrane
Type Confidence:	0.98
Topology Confidence:	0.82
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMQDLRLILI VVGAIAIIAL LLHGLWTSRK ERSSLFRDRP VKRLKQERVE TPIESLDEGV  60
   61 GEVRVRTAHP QEKPSFSHID DDDEDMPVIQ HTETQPAQVK TEPRQKPFAS VQTDYDDPLL 120
  121 GGLSAEQPPH ESQRDPLLGS VEEPYSQPRH AEPQHVAEHA PRVAPQQVES QPEPAVPAPE 180
  181 VKPQKLKETV LVLHVAAHHG GTLGGELLLQ SVLQSGFQFG EMGIFHRHLS PAGSGPVLFS 240
  241 LANMVKPGSF DPDTMSDFST PGVSMFMMVP SYGDANQNFK LMLQSAQRIA DDVGGVVLDD 300
  301 ERRMMTPQKL ETYKARIREV LDANASA

Type	Start	End	Confidence
Cytoplasmic	1	6	0.82
Transmembrane Helix	7	27	0.94
Non-Cytoplasmic	28	327	0.89