YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|77973608, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.82
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQEKMMKRTF IMVLDSFGIG ASADAKKFGD EGADTLGHIA EACARGEADI GRSGPLKLPN  60
   61 LSRLGLGKAA EESTGKFPVG LDKNADIIGA YGYASELSSG KDTPSGHWEI AGVPVLFDWG 120
  121 YFSDVENSFP QELLNKLVKR ANLPGYLGNC HSSGTVILDQ LGEEHMKTGK PIFYTSADSV 180
  181 FQIACHEETF GLDRLYELCE IAREELTEGG YNIGRVIARP FIGDKPGNFQ RTGNRHDLAV 240
  241 EPPAPTVLKK LVEEKGGEVV SIGKIADIYA HVGITQKVKA TGLDALFDAT VEEMKKAGDN 300
  301 TIVFTNFVDF DSSYGHRRDV AGYAAALELF DRRLPELMAL VKEDDILILT ADHGCDPTWP 360
  361 GTDHTREHIP VLVYGPKVKP GSLGHRETFA DIGQTVAKYF NLSPMDYGKN ML

Type	Start	End	Confidence
Signal Peptide	1	23	0.82
N-region	1	14
H-region	15	20
C-region	21	23
Cleavage Site	23	24
Non-Cytoplasmic	24	412	0.99