YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|77973572
Protein type:	Globular with Signal Peptide
Type Confidence:	0.88
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPSAMAGTWS LGASALVSPD PYRGKNDRVY PVPIVSYESD NFYFRTLAAG YYLWKDDTNR  60
   61 LSIDAYFLPL HFKPGDSDDQ QMKQLDKRRS TMMAGVSYSH IEDWGTLRTM FSGDVLDNSG 120
  121 GFIGDLAYLY RFNVDSWTLT PGVGVSWSSD DQNDYYYGVS RSESARSGLA QYSPSDSWAP 180
  181 YLELSVNYNI NPNWNAFFTG RYIRLASEVK NSPMVDASYS GLLWTGVTYT FR

Type	Start	End	Confidence
Signal Peptide	1	19	0.83
N-region	1	10
H-region	11	16
C-region	17	19
Cleavage Site	19	20
Non-Cytoplasmic	20	232	0.99