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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|77973384
Protein type: Globular with Signal Peptide
Type Confidence: 0.88
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVKLGLVRFS LLLASVLVLL AMVVQMAVTF VLSGSVETLD LVRSIFFGLL ITPWAVYFLS  60
   61 VVVEQLEESR QRLSRLVDKL EVMRHRDLEL NNQLTENIAQ LNQEIVEREK AEKAHLQVVD 120
  121 KLKEEMGHRE QAQVELGQQS ALLRSFLDAS PDLVYYRNEA NEFSGCNRAM ELLTGKSEKQ 180
  181 LVGLTPKDVY APDIAEKVME TDEKVFRHNV SLTYEQWLVY PDGRKACFEL RKVPFYDRVG 240
  241 KRHGLMGFGR DITERKRYQD ALENASRDKT TFISTISHEL RTPLNGIVGL SRILLDTELD 300
  301 SEQLKYLKTI HVSAITLGNI FNDIIEMDKL ERRKVQLDNQ PIDFTGFMAD LENLSGLLVQ 360
  361 PKGLKFIMEP QLPLPEKIIT DGTRLRQILW NLIGNAVKFT QQGKIVVRVR REGSDRLIFE 420
  421 VEDSGMGIPE DEQDKIFAMY YQVKDSNGGR PATGTGIGLA VSKRLAQSMG GDITVKSTQG 480
  481 AGSCFTLTIK APAVHAVSTT PSGDDMPLPA LHVLLVEDIE LNVIVARSVL EKLGNSVEVA 540
  541 MNGHDALAMF KPDDFDLVLL DIQLPDMSGL DIARQIRANY DNQSLPPLVA LTANVLKDKK 600
  601 EYLDAGMDDV LSKPLSVPAL TAMIKQFWDQ KPSSSAKKQE HKVMQTHESL LDTAMLEQYI 660
  661 DLVGPQLIHQ SLEMFEQMMP GYLAVLDSNM TARDQKGITE EAHKIKGAAG SVGLRHIQQL 720
  721 AQQIQTPTLP AWWDNVQDWV DELKSEWRND VQVLREWAAE AEKK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle