YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|77973223
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.88
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSAPLIHTEQ RTIPRWIDII ITALAWFGFI FLFVKGFLDM IHRAPNMGPI PFRVYILAGL  60
   61 TTLALYAAIA AFNAVVLIVW AKYNQVRFQV ERRGHRPHLN DDELADSMEM SGDMIAQLKA 120
  121 GSCLTLYNDE HGQLLEVKEG LQLPTVAPVV NLRRG

Type	Start	End	Confidence
Cytoplasmic	1	15	0.90
Transmembrane Helix	16	38	0.88
Non-Cytoplasmic	39	55	0.87
Transmembrane Helix	56	80	0.88
Cytoplasmic	81	155	0.94