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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|238789934, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.35
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIVLAIIMVS LPTLVIGYLV EAEGRDALLQ EKKAKLFAVT TLLDNALADS FSLYPDLPRE  60
   61 QRIQALNQHL APVTDEITRA FSGVGAGYYN KALDAIITYA PQAQYGNAVG ITINLDHPGH 120
  121 EVMASGKPLV SSGTQVRGNI MNAMIPIKRD NQILGYIWAN ELSNDIDRQA LSMDIKIIAV 180
  181 ISIGLLLSLW LIIAFSRRFA SDIDIIKSSL TNLSLNLNTE LPAMKGEMGE ISDSVNALSR 240
  241 ALRETKTLNE LILESAADGV ISVDIKGCVT MINPAGEIIT GYSRKELIGK PYAEVFEKVD 300
  301 FDSPVLDTLF RGIKHVALEI DYPGKNRTIQ LSISTSQLRN AQGETLGALA IFTDLTAKKE 360
  361 VQRRIEQAER LATLGELMAG VAHEVRNPLT AISGFVQILK DSEKDPQRLE YTHIILKEVQ 420
  421 SINRVIQQLL DFSRPRIGRY HQVNLNQIIR ESLILVKTKG VEARVDFHVQ LDENLSDIEA 480
  481 DGELLKQVLL NILINAVQSI VARGEIIIST QALDDNYQQI TIQDNGCGIA EDIKAKVFDP 540
  541 FYTTKPSGTG LGLSISQRII ASHDGDIRLE SQPNKGTTFI IILPVKHGAG NLL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle